Aliases : evm_27.TU.AmTr_v1.0_scaffold00114.66
Description : RNA biosynthesis.transcriptional activation.B3 superfamily.RAV/NGATHA transcription factor
Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0000986 (SeedPlants) Phylogenetic Tree(s): OG_06_0000986_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00114p00142630 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_5039g0010 | No alias | transcription factor (RAV/NGATHA) | 0.02 | Archaeplastida | |
Mp2g22250.1 | No alias | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | Archaeplastida | |
Zm00001e000156_P001 | No alias | transcription factor (RAV/NGATHA) | 0.01 | Archaeplastida | |
Zm00001e002215_P001 | No alias | transcription factor (RAV/NGATHA) | 0.01 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003340 | B3_DNA-bd | 9 | 103 |
No external refs found! |