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  5. AMTR_s00116p00130490

AMTR_s00116p00130490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00116.34

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.BTB/POZ substrate adaptor components.LRB-type component


Gene families : OG0000778 (Archaeplastida) Phylogenetic Tree(s): OG0000778_tree ,
OG_05_0012835 (LandPlants) Phylogenetic Tree(s): OG_05_0012835_tree ,
OG_06_0012832 (SeedPlants) Phylogenetic Tree(s): OG_06_0012832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00116p00130490
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
Solyc12g056130.2.1 No alias component LRB of CUL3-BTB E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!