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  5. AMTR_s00116p00138800

AMTR_s00116p00138800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00116.41

Description : BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana


Gene families : OG0000778 (Archaeplastida) Phylogenetic Tree(s): OG0000778_tree ,
OG_05_0012835 (LandPlants) Phylogenetic Tree(s): OG_05_0012835_tree ,
OG_06_0012832 (SeedPlants) Phylogenetic Tree(s): OG_06_0012832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00116p00138800
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00116p00144040 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01012555001 No alias BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01027032001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
InterPro domains Description Start Stop
IPR011705 BACK 16 59
No external refs found!