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  5. AMTR_s00119p00032590

AMTR_s00119p00032590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00119.15

No description available


Gene families : OG0006244 (Archaeplastida) Phylogenetic Tree(s): OG0006244_tree ,
OG_05_0044990 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0039551 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00032590
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT3G54360 No alias zinc ion binding 0.03 Archaeplastida
Cpa|evm.model.tig00001155.24 No alias Protein NCA1 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!