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  5. AMTR_s00119p00074870

AMTR_s00119p00074870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00119.54

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00074870
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.03 Archaeplastida
AT1G74660 MIF1 mini zinc finger 1 0.06 Archaeplastida
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.02 Archaeplastida
AT2G02540 ZHD3, HB21, ATHB21, ZFHD4 homeobox protein 21 0.02 Archaeplastida
AT3G28917 MIF2 mini zinc finger 2 0.04 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.04 Archaeplastida
AT5G65410 ZHD1, ZFHD2, HB25, ATHB25 homeobox protein 25 0.02 Archaeplastida
GSVIVT01000250001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01009128001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01012772001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_18045 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Gb_37393 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os02g47770.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os08g37400.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os09g24810.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os09g29130.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os11g13930.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
LOC_Os12g10630.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_101972g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_12314g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_171206g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_173815g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_19630g0030 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_32594g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
MA_36755g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_470326g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_91212g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Pp3c1_15290V3.1 No alias homeobox protein 33 0.02 Archaeplastida
Pp3c21_11010V3.1 No alias homeobox protein 22 0.05 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.04 Archaeplastida
Pp3c7_15000V3.1 No alias homeobox protein 33 0.04 Archaeplastida
Smo111756 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Smo38995 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Smo59934 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Smo59936 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Solyc02g087970.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc03g116070.1.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
Solyc04g074990.3.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e008082_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e009830_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e015590_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.02 Archaeplastida
Zm00001e023331_P001 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Zm00001e034119_P001 No alias transcription factor (zf-HD) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 87 141
No external refs found!