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  5. AMTR_s00119p00095480

AMTR_s00119p00095480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00119.73

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00095480
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.03 Archaeplastida
GSVIVT01020718001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01033515001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Gb_08427 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Gb_38388 No alias PHR1 transcription factor involved in proline synthesis... 0.05 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os07g48596.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.05 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c23_3520V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_14670V3.1 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
Pp3c3_30710V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_34700V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c7_20870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc06g051060.4.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc06g066340.4.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc08g076400.3.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Solyc10g085620.2.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030689_P002 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 140 189
IPR001005 SANT/Myb 44 95
No external refs found!