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  5. AMTR_s00119p00120480

AMTR_s00119p00120480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00119.93

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000223 (SeedPlants) Phylogenetic Tree(s): OG_06_0000223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00120480
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
Gb_02445 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Gb_02446 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g59870.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g09230.1 No alias xylogen-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os03g57970.2 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g57980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g07790.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os07g07920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g07930.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os07g30590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Mp1g16210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g21600.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Pp3c11_11470V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
Pp3c1_31020V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
Pp3c2_6280V3.1 No alias glycosylphosphatidylinositol-anchored lipid protein transfer 1 0.03 Archaeplastida
Pp3c6_760V3.1 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
Solyc01g105010.3.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc03g005200.3.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc03g119620.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g069110.4.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc06g073660.3.1 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g065410.4.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g065430.4.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Solyc09g082300.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g072030.3.1 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e005336_P001 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e005959_P003 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e005961_P001 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e011462_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e011883_P002 No alias xylogen-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e028880_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e032912_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038813_P001 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 15 112
No external refs found!