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  5. AMTR_s00121p00121190

AMTR_s00121p00121190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00121.30

Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0015529 (Archaeplastida) Phylogenetic Tree(s): OG0015529_tree ,
OG_05_0012081 (LandPlants) Phylogenetic Tree(s): OG_05_0012081_tree ,
OG_06_0012161 (SeedPlants) Phylogenetic Tree(s): OG_06_0012161_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00121p00121190
Cluster HCCA: Cluster_253


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 13 59
IPR002885 Pentatricopeptide_repeat 389 412
IPR002885 Pentatricopeptide_repeat 565 588
IPR002885 Pentatricopeptide_repeat 89 116
IPR002885 Pentatricopeptide_repeat 117 140
IPR002885 Pentatricopeptide_repeat 418 444
IPR002885 Pentatricopeptide_repeat 288 314
IPR002885 Pentatricopeptide_repeat 215 245
IPR002885 Pentatricopeptide_repeat 316 342
IPR002885 Pentatricopeptide_repeat 187 209
IPR002885 Pentatricopeptide_repeat 454 480
No external refs found!