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  5. AMTR_s00121p00136870

AMTR_s00121p00136870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00121.46

Description : Germin-like protein 9-3 OS=Oryza sativa subsp. japonica


Gene families : OG0001292 (Archaeplastida) Phylogenetic Tree(s): OG0001292_tree ,
OG_05_0000790 (LandPlants) Phylogenetic Tree(s): OG_05_0000790_tree ,
OG_06_0002156 (SeedPlants) Phylogenetic Tree(s): OG_06_0002156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00121p00136870
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00164000 evm_27.TU.AmTr_v1... Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
AMTR_s00121p00137080 evm_27.TU.AmTr_v1... Germin-like protein 9-3 OS=Oryza sativa subsp. japonica 0.09 Archaeplastida
Gb_05122 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os09g39510.1 No alias Germin-like protein 9-1 OS=Oryza sativa subsp. japonica... 0.1 Archaeplastida
LOC_Os09g39520.1 No alias Putative germin-like protein 9-2 OS=Oryza sativa subsp.... 0.1 Archaeplastida
LOC_Os09g39530.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.09 Archaeplastida
Mp2g13190.1 No alias Germin-like protein 9-1 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Mp5g00860.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g00890.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g00900.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g23410.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23420.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23460.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23470.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23490.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp5g23500.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c15_18180V3.1 No alias germin-like protein subfamily 2 member 2 precursor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 65 189
No external refs found!