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  5. AMTR_s00122p00090120

AMTR_s00122p00090120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.35

Description : Phytohormones.gibberellin.synthesis.gibberellin 3-oxidase


Gene families : OG0003432 (Archaeplastida) Phylogenetic Tree(s): OG0003432_tree ,
OG_05_0002380 (LandPlants) Phylogenetic Tree(s): OG_05_0002380_tree ,
OG_06_0002484 (SeedPlants) Phylogenetic Tree(s): OG_06_0002484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00090120
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017178001 No alias Phytohormones.gibberellin.synthesis.gibberellin 3-oxidase 0.04 Archaeplastida
Solyc03g119910.4.1 No alias gibberellin 3-oxidase 0.03 Archaeplastida
Zm00001e016719_P001 No alias gibberellin 3-oxidase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 199 296
IPR026992 DIOX_N 47 150
No external refs found!