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  5. AMTR_s00122p00119310

AMTR_s00122p00119310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.55

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00119310
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00030260 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.06 Archaeplastida
GSVIVT01033804001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01034746001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_04573 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_05443 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_30095 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os01g52560.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os02g21340.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10429200g0010 No alias ABC transporter G family member 34 OS=Arabidopsis... 0.03 Archaeplastida
MA_300423g0010 No alias ABC transporter G family member 36 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c12_17520V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c14_11830V3.1 No alias pleiotropic drug resistance 7 0.02 Archaeplastida
Smo115821 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo417263 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Zm00001e019932_P002 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e035120_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1113 1327
IPR013525 ABC_2_trans 433 645
IPR013581 PDR_assoc 650 714
IPR003439 ABC_transporter-like 840 968
IPR003439 ABC_transporter-like 121 278
No external refs found!