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  5. AMTR_s00122p00121250

AMTR_s00122p00121250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.59

Description : Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrhiza


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0002851 (LandPlants) Phylogenetic Tree(s): OG_05_0002851_tree ,
OG_06_0009120 (SeedPlants) Phylogenetic Tree(s): OG_06_0009120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00121250
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 Archaeplastida
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.03 Archaeplastida
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.03 Archaeplastida
MA_10429185g0020 No alias ABC transporter G family member 35 OS=Arabidopsis... 0.04 Archaeplastida
MA_10433422g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10437173g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_10437173g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10437197g0020 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_124298g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_184352g0010 No alias ABC transporter G family member 36 OS=Oryza sativa... 0.04 Archaeplastida
MA_249533g0010 No alias ABC transporter G family member 31 OS=Arabidopsis... 0.03 Archaeplastida
MA_38272g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_525120g0010 No alias ABC transporter G family member 51 OS=Oryza sativa... 0.04 Archaeplastida
MA_84624g0010 No alias subfamily ABCG transporter 0.05 Archaeplastida
Pp3c18_21520V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Pp3c5_23360V3.1 No alias pleiotropic drug resistance 7 0.02 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!