AMTR_s00124p00098540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00124.20

Description : Osmotin-like protein OS=Solanum lycopersicum


Gene families : OG0000084 (Archaeplastida) Phylogenetic Tree(s): OG0000084_tree ,
OG_05_0045066 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0039629 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00124p00098540
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT4G38660 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Archaeplastida
GSVIVT01018769001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032560001 No alias Thaumatin-like protein OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_14847 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_30191 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g36580.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g05600.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g43380.1 No alias Thaumatin-like protein OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Smo271835 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo426298 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g111330.4.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g081560.3.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e013093_P001 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001938 Thaumatin 43 248
No external refs found!