1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00126p00122920

AMTR_s00126p00122920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00126.60

No description available


Gene families : OG0006474 (Archaeplastida) Phylogenetic Tree(s): OG0006474_tree ,
OG_05_0005147 (LandPlants) Phylogenetic Tree(s): OG_05_0005147_tree ,
OG_06_0003344 (SeedPlants) Phylogenetic Tree(s): OG_06_0003344_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00126p00122920
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Solyc12g088850.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g088860.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023820_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 3 20
No external refs found!