AMTR_s00128p00115590 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00128.39

No description available

Gene families : OG0002181 (Archaeplastida) Phylogenetic Tree(s): OG0002181_tree ,
OG_05_0001333 (LandPlants) Phylogenetic Tree(s): OG_05_0001333_tree ,
OG_06_0000749 (SeedPlants) Phylogenetic Tree(s): OG_06_0000749_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00128p00115590
Cluster	HCCA: Cluster_156

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00213150	evm_27.TU.AmTr_v1...	No description available	0.01	Archaeplastida
AMTR_s00056p00222760	No alias	No description available	0.02	Archaeplastida
AMTR_s00070p00148660	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00086p00067770	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005162	Retrotrans_gag_dom	49	140

External Links

No external refs found!