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  5. AMTR_s00129p00085100

AMTR_s00129p00085100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00129.62

Description : Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component


Gene families : OG0003974 (Archaeplastida) Phylogenetic Tree(s): OG0003974_tree ,
OG_05_0004309 (LandPlants) Phylogenetic Tree(s): OG_05_0004309_tree ,
OG_06_0004017 (SeedPlants) Phylogenetic Tree(s): OG_06_0004017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00129p00085100
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AT1G73430 No alias sec34-like family protein 0.03 Archaeplastida
Cre03.g203750 No alias Vesicle trafficking.target membrane tethering.COG... 0.03 Archaeplastida
Gb_40519 No alias component COG3 of COG (Conserved-Oligomeric Golgi) complex 0.03 Archaeplastida
Smo113648 No alias Vesicle trafficking.target membrane tethering.COG... 0.04 Archaeplastida
Zm00001e004051_P005 No alias component COG3 of COG (Conserved-Oligomeric Golgi) complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005801 cis-Golgi network IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
CC GO:0000922 spindle pole IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008158 hedgehog receptor activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007265 COG_su3 112 265
No external refs found!