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  5. AMTR_s00129p00117090

AMTR_s00129p00117090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00129.91

No description available


Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0000889 (LandPlants) Phylogenetic Tree(s): OG_05_0000889_tree ,
OG_06_0000875 (SeedPlants) Phylogenetic Tree(s): OG_06_0000875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00129p00117090
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT2G25360 No alias RING/U-box superfamily protein 0.05 Archaeplastida
LOC_Os08g35070.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
LOC_Os09g11170.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 Archaeplastida
Pp3c3_13290V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc03g117860.3.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
Zm00001e022192_P001 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008517 folic acid transmembrane transporter activity IEP Neighborhood
MF GO:0008518 folate:anion antiporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0090482 vitamin transmembrane transporter activity IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002867 IBR_dom 159 212
No external refs found!