AMTR_s00129p00119770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00129.96

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00129p00119770
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.03 Archaeplastida
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 Archaeplastida
AT5G53290 CRF3 cytokinin response factor 3 0.02 Archaeplastida
GSVIVT01022076001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.06 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_100577g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10432800g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_164803g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_40048g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_912855g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
Pp3c11_23290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_5010V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c27_1350V3.1 No alias ERF domain protein 12 0.02 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c3_33930V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_2530V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_810V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_16660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_19350V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Smo428344 No alias No description available 0.02 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc03g093560.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g014530.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g072900.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc04g078640.3.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g009110.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc12g056590.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e006139_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e033965_P001 No alias transcription factor (DREB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
CC GO:0005960 glycine cleavage complex IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 92 141
No external refs found!