1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00131p00097100

AMTR_s00131p00097100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.68

Description : Solute transport.carrier-mediated transport.DMT superfamily.UmamiT-type solute transporter


Gene families : OG0000099 (Archaeplastida) Phylogenetic Tree(s): OG0000099_tree ,
OG_05_0000034 (LandPlants) Phylogenetic Tree(s): OG_05_0000034_tree ,
OG_06_0000429 (SeedPlants) Phylogenetic Tree(s): OG_06_0000429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00097100
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00261210 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.07 Archaeplastida
AMTR_s00040p00026230 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
AMTR_s00088p00178880 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
AMTR_s00088p00179990 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.04 Archaeplastida
AT1G44800 No alias nodulin MtN21 /EamA-like transporter family protein 0.04 Archaeplastida
AT2G37460 No alias nodulin MtN21 /EamA-like transporter family protein 0.04 Archaeplastida
GSVIVT01026595001 No alias Solute transport.carrier-mediated transport.DMT... 0.02 Archaeplastida
LOC_Os02g02310.1 No alias solute transporter (UmamiT) 0.03 Archaeplastida
MA_10129719g0010 No alias solute transporter (UmamiT) 0.03 Archaeplastida
MA_10434269g0010 No alias solute transporter (UmamiT) 0.03 Archaeplastida
MA_110313g0010 No alias solute transporter (UmamiT) 0.03 Archaeplastida
MA_16362g0010 No alias solute transporter (UmamiT) 0.02 Archaeplastida
MA_168758g0010 No alias solute transporter (UmamiT) 0.03 Archaeplastida
MA_38606g0010 No alias solute transporter (UmamiT) 0.03 Archaeplastida
MA_931212g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g14400.1 No alias solute transporter (UmamiT) 0.05 Archaeplastida
Pp3c12_19870V3.1 No alias Walls Are Thin 1 0.03 Archaeplastida
Smo34347 No alias Solute transport.carrier-mediated transport.DMT... 0.02 Archaeplastida
Solyc04g011340.3.1 No alias solute transporter (UmamiT) 0.04 Archaeplastida
Solyc06g031710.3.1 No alias solute transporter (UmamiT) 0.03 Archaeplastida
Solyc11g012930.2.1 No alias solute transporter (UmamiT) 0.03 Archaeplastida
Zm00001e015972_P002 No alias solute transporter (UmamiT) 0.03 Archaeplastida
Zm00001e017469_P001 No alias solute transporter (UmamiT) 0.03 Archaeplastida
Zm00001e027335_P001 No alias solute transporter (UmamiT) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000620 EamA_dom 174 282
IPR000620 EamA_dom 44 107
No external refs found!