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  5. AMTR_s00134p00105640

AMTR_s00134p00105640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00134.34

Description : Dirigent protein 21 OS=Arabidopsis thaliana


Gene families : OG0000064 (Archaeplastida) Phylogenetic Tree(s): OG0000064_tree ,
OG_05_0000024 (LandPlants) Phylogenetic Tree(s): OG_05_0000024_tree ,
OG_06_0000028 (SeedPlants) Phylogenetic Tree(s): OG_06_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00134p00105640
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00179870 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00041p00185100 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00134p00119640 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_35611 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g01620.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g13800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g14300.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo115256 No alias No description available 0.03 Archaeplastida
Solyc10g055200.1.1 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e002691_P001 No alias Dirigent protein 21 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 126 178
IPR004265 Dirigent 48 120
No external refs found!