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  5. AMTR_s00135p00046620

AMTR_s00135p00046620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00135.12

Description : LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana


Gene families : OG0000609 (Archaeplastida) Phylogenetic Tree(s): OG0000609_tree ,
OG_05_0000292 (LandPlants) Phylogenetic Tree(s): OG_05_0000292_tree ,
OG_06_0000148 (SeedPlants) Phylogenetic Tree(s): OG_06_0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00135p00046620
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000819001 No alias Probable LRR receptor-like serine/threonine-protein... 0.04 Archaeplastida
MA_10437059g0030 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.01 Archaeplastida
MA_375754g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_548546g0010 No alias LRR receptor-like serine/threonine-protein kinase EFR... 0.02 Archaeplastida
MA_667892g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7539398g0010 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 179 215
IPR001611 Leu-rich_rpt 155 175
IPR013210 LRR_N_plant-typ 41 78
No external refs found!