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  5. AMTR_s00137p00078020

AMTR_s00137p00078020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00137.36

Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0005728 (Archaeplastida) Phylogenetic Tree(s): OG0005728_tree ,
OG_05_0003877 (LandPlants) Phylogenetic Tree(s): OG_05_0003877_tree ,
OG_06_0003463 (SeedPlants) Phylogenetic Tree(s): OG_06_0003463_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00137p00078020
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT3G49950 No alias GRAS family transcription factor 0.02 Archaeplastida
Solyc07g052960.3.1 No alias transcription factor (GRAS) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 47 413
No external refs found!