1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00138p00027500

AMTR_s00138p00027500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00138.8

Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana


Gene families : OG0000598 (Archaeplastida) Phylogenetic Tree(s): OG0000598_tree ,
OG_05_0000999 (LandPlants) Phylogenetic Tree(s): OG_05_0000999_tree ,
OG_06_0001532 (SeedPlants) Phylogenetic Tree(s): OG_06_0001532_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00138p00027500
Cluster HCCA: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
Pp3c19_9760V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.07 Archaeplastida
Zm00001e012169_P002 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e023279_P004 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 85 145
No external refs found!