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  5. AMTR_s00138p00036780

AMTR_s00138p00036780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00138.15

Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0045238 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0039803 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00138p00036780
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031929001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.08 Archaeplastida
Pp3c8_4000V3.1 No alias PLATZ transcription factor family protein 0.01 Archaeplastida
Zm00001e002426_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e007100_P003 No alias transcription factor (PLATZ) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 43 114
No external refs found!