AMTR_s00140p00038880 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00140.12

Description : Cell cycle.regulation.cyclin-dependent kinase complex.CKS scaffolding component

Gene families : OG0003144 (Archaeplastida) Phylogenetic Tree(s): OG0003144_tree ,
OG_05_0004895 (LandPlants) Phylogenetic Tree(s): OG_05_0004895_tree ,
OG_06_0007465 (SeedPlants) Phylogenetic Tree(s): OG_06_0007465_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00140p00038880
Cluster	HCCA: Cluster_237

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g180350	No alias	Cell cycle.regulation.cyclin-dependent kinase...	0.08	Archaeplastida
LOC_Os03g05300.1	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.06	Archaeplastida
MA_156774g0010	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.02	Archaeplastida
MA_364061g0010	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.03	Archaeplastida
MA_475176g0010	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.13	Archaeplastida
MA_492153g0010	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.03	Archaeplastida
Mp1g16700.1	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.04	Archaeplastida
Pp3c2_6200V3.1	No alias	CDK-subunit 2	0.02	Archaeplastida
Zm00001e000375_P001	No alias	scaffolding component CKS of cyclin-dependent kinase complex	0.17	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0007049	cell cycle	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEA	Interproscan
MF	GO:0019207	kinase regulator activity	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Neighborhood
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	Neighborhood
MF	GO:0047134	protein-disulfide reductase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000789	Cyclin-dep_kinase_reg-sub	3	72

External Links

No external refs found!