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  5. AMTR_s00141p00103540

AMTR_s00141p00103540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00141.39

No description available


Gene families : OG0000610 (Archaeplastida) Phylogenetic Tree(s): OG0000610_tree ,
OG_05_0009837 (LandPlants) Phylogenetic Tree(s): OG_05_0009837_tree ,
OG_06_0008063 (SeedPlants) Phylogenetic Tree(s): OG_06_0008063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00141p00103540
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G29980 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT1G80240 No alias Protein of unknown function, DUF642 0.04 Archaeplastida
AT2G41800 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT2G41810 No alias Protein of unknown function, DUF642 0.05 Archaeplastida
AT3G08030 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT4G32460 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
AT5G11420 No alias Protein of unknown function, DUF642 0.03 Archaeplastida
Gb_04470 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_14930 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g42520.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g55190.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g59300.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g41740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g04050.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g10620.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434741g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1867024g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_251322g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_32863g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_44504g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_54830g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6019571g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_655783g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_770477g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc03g120040.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g015610.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006089_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007713_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007714_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013973_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019773_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020676_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029029_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041141_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006946 DUF642 59 371
No external refs found!