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  5. AMTR_s00142p00041710

AMTR_s00142p00041710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.18

Description : Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00041710
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00106150 evm_27.TU.AmTr_v1... Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
GSVIVT01015167001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017227001 No alias No description available 0.03 Archaeplastida
GSVIVT01017229001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017267001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01020273001 No alias Probable disease resistance protein At5g63020... 0.03 Archaeplastida
GSVIVT01020278001 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os04g43440.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g36410.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g10410.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10432222g0010 No alias No annotation 0.03 Archaeplastida
MA_10436967g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_112657g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_122523g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_14682g0010 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
MA_31174g0010 No alias Probable disease resistance protein At1g61190... 0.03 Archaeplastida
MA_486866g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5551624g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7058180g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_733g0010 No alias Probable disease resistance protein At1g15890... 0.03 Archaeplastida
MA_9010869g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g037540.3.1 No alias Probable disease resistance protein At4g27220... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009584 detection of visible light IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0018298 protein-chromophore linkage IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 158 354
No external refs found!