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  5. AMTR_s00142p00041790

AMTR_s00142p00041790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.19

Description : Disease resistance protein RPS2 OS=Arabidopsis thaliana


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00041790
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G61180 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Archaeplastida
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 Archaeplastida
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT5G63020 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020278001 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_12853 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_12858 No alias Putative disease resistance protein At3g14460... 0.03 Archaeplastida
LOC_Os01g57870.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10436599g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10436967g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_122523g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_162415g0010 No alias Probable disease resistance protein At1g61310... 0.02 Archaeplastida
MA_44026g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_5730007g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7058180g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_834155g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_90078g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9010869g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019599_P001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0009039 urease activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019627 urea metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043419 urea catabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043605 cellular amide catabolic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 201 222
No external refs found!