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  5. AMTR_s00142p00054380

AMTR_s00142p00054380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.31

Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.CASC3 component


Gene families : OG0004329 (Archaeplastida) Phylogenetic Tree(s): OG0004329_tree ,
OG_05_0003530 (LandPlants) Phylogenetic Tree(s): OG_05_0003530_tree ,
OG_06_0006568 (SeedPlants) Phylogenetic Tree(s): OG_06_0006568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00054380
Cluster HCCA: Cluster_132


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR018545 Btz_dom 130 222
No external refs found!