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  5. AMTR_s00142p00073110

AMTR_s00142p00073110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.44

Description : Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0010085 (Archaeplastida) Phylogenetic Tree(s): OG0010085_tree ,
OG_05_0010116 (LandPlants) Phylogenetic Tree(s): OG_05_0010116_tree ,
OG_06_0008658 (SeedPlants) Phylogenetic Tree(s): OG_06_0008658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00073110
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT1G73400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
LOC_Os02g52220.1 No alias Pentatricopeptide repeat-containing protein At1g73400,... 0.03 Archaeplastida
Solyc04g079150.1.1 No alias Pentatricopeptide repeat-containing protein At1g73400,... 0.05 Archaeplastida
Zm00001e015907_P001 No alias Pentatricopeptide repeat-containing protein At1g73400,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 314 363
IPR002885 Pentatricopeptide_repeat 392 433
IPR002885 Pentatricopeptide_repeat 454 501
IPR002885 Pentatricopeptide_repeat 245 290
No external refs found!