AMTR_s00142p00106070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00142.70

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.xylogen-type arabinogalactan protein


Gene families : OG0000162 (Archaeplastida) Phylogenetic Tree(s): OG0000162_tree ,
OG_05_0000065 (LandPlants) Phylogenetic Tree(s): OG_05_0000065_tree ,
OG_06_0000848 (SeedPlants) Phylogenetic Tree(s): OG_06_0000848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00142p00106070
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Archaeplastida
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
LOC_Os03g57990.1 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.04 Archaeplastida
MA_139470g0010 No alias xylogen-type arabinogalactan protein 0.03 Archaeplastida
MA_9903145g0010 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 14 110
No external refs found!