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  5. AMTR_s00146p00053840

AMTR_s00146p00053840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00146.29

No description available


Gene families : OG0000360 (Archaeplastida) Phylogenetic Tree(s): OG0000360_tree ,
OG_05_0000186 (LandPlants) Phylogenetic Tree(s): OG_05_0000186_tree ,
OG_06_0000535 (SeedPlants) Phylogenetic Tree(s): OG_06_0000535_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00146p00053840
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00054950 evm_27.TU.AmTr_v1... F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_103305g0010 No alias F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis... 0.03 Archaeplastida
MA_657411g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9686g0010 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!