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  5. AT1G62270

AT1G62270


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G62270
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.08 Archaeplastida
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G32140 No alias F-box family protein 0.18 Archaeplastida
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT1G65990 No alias type 2 peroxiredoxin-related / thiol specific... 0.11 Archaeplastida
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT1G67450 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT1G67455 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.13 Archaeplastida
AT2G39355 No alias No description available 0.04 Archaeplastida
AT3G03405 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G16020 No alias F-box associated ubiquitination effector protein 0.02 Archaeplastida
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17280 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G17480 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G17490 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.15 Archaeplastida
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.22 Archaeplastida
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT3G18330 No alias F-box family protein 0.07 Archaeplastida
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G19560 No alias F-box family protein 0.21 Archaeplastida
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G20710 No alias F-box family protein 0.07 Archaeplastida
AT3G21165 No alias No description available 0.08 Archaeplastida
AT3G22421 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G25460 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G44120 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.18 Archaeplastida
AT4G10190 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.14 Archaeplastida
AT5G25195 No alias No description available 0.03 Archaeplastida
AT5G36200 No alias F-box and associated interaction domains-containing protein 0.11 Archaeplastida
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.17 Archaeplastida
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.17 Archaeplastida
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.22 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.18 Archaeplastida
AT5G51000 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G62830 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006857 oligopeptide transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015295 solute:proton symporter activity IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP Neighborhood
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 205 379
IPR001810 F-box_dom 8 48
No external refs found!