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  5. AMTR_s00149p00088700

AMTR_s00149p00088700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00149.75

No description available


Gene families : OG0008671 (Archaeplastida) Phylogenetic Tree(s): OG0008671_tree ,
OG_05_0008079 (LandPlants) Phylogenetic Tree(s): OG_05_0008079_tree ,
OG_06_0005086 (SeedPlants) Phylogenetic Tree(s): OG_06_0005086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00149p00088700
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001206001 No alias No description available 0.05 Archaeplastida
GSVIVT01001208001 No alias No description available 0.03 Archaeplastida
GSVIVT01001214001 No alias No description available 0.03 Archaeplastida
GSVIVT01003109001 No alias No description available 0.03 Archaeplastida
GSVIVT01017530001 No alias No description available 0.03 Archaeplastida
GSVIVT01017534001 No alias No description available 0.03 Archaeplastida
GSVIVT01017538001 No alias No description available 0.06 Archaeplastida
GSVIVT01017541001 No alias No description available 0.03 Archaeplastida
GSVIVT01019157001 No alias No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 79 135
No external refs found!