AMTR_s00152p00021900 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00152.3

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein

Gene families : OG0000275 (Archaeplastida) Phylogenetic Tree(s): OG0000275_tree ,
OG_05_0000172 (LandPlants) Phylogenetic Tree(s): OG_05_0000172_tree ,
OG_06_0000190 (SeedPlants) Phylogenetic Tree(s): OG_06_0000190_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00152p00021900
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00027740 evm_27.TU.AmTr_v1... Probable ubiquitin-conjugating enzyme E2 37... 0.04 Archaeplastida
AT3G08690 ATUBC11, UBC11 ubiquitin-conjugating enzyme 11 0.02 Archaeplastida
Gb_07393 No alias Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os09g12230.1 No alias conjugation E2 protein 0.02 Archaeplastida
MA_194g0030 No alias conjugation E2 protein 0.02 Archaeplastida
Pp3c14_23460V3.1 No alias ubiquitin-conjugating enzyme 10 0.02 Archaeplastida
Solyc02g083570.3.1 No alias conjugation E2 protein 0.04 Archaeplastida
Zm00001e025244_P002 No alias conjugation E2 protein 0.02 Archaeplastida
Zm00001e033719_P001 No alias conjugation E2 protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 12 147
No external refs found!