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  5. AMTR_s00152p00084120

AMTR_s00152p00084120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00152.28

Description : Solute transport.channels.MCA mechanosensitive cation channel


Gene families : OG0002116 (Archaeplastida) Phylogenetic Tree(s): OG0002116_tree ,
OG_05_0001916 (LandPlants) Phylogenetic Tree(s): OG_05_0001916_tree ,
OG_06_0002070 (SeedPlants) Phylogenetic Tree(s): OG_06_0002070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00152p00084120
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT4G35920 MCA1 PLAC8 family protein 0.03 Archaeplastida
Gb_10308 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_16864 No alias mechanosensitive cation channel (MCA) 0.06 Archaeplastida
LOC_Os03g06120.3 No alias mechanosensitive cation channel (MCA) 0.1 Archaeplastida
MA_10433546g0010 No alias Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.04 Archaeplastida
MA_1425g0010 No alias Cell number regulator 13 OS=Zea mays... 0.04 Archaeplastida
MA_191168g0010 No alias Protein MID1-COMPLEMENTING ACTIVITY 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_2315602g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_424555g0010 No alias mechanosensitive cation channel (MCA) 0.02 Archaeplastida
MA_6161g0010 No alias Cell number regulator 13 OS=Zea mays... 0.02 Archaeplastida
Mp5g19510.1 No alias mechanosensitive cation channel (MCA) 0.05 Archaeplastida
Pp3c12_21430V3.1 No alias PLAC8 family protein 0.02 Archaeplastida
Pp3c12_21520V3.1 No alias PLAC8 family protein 0.04 Archaeplastida
Solyc02g083540.3.1 No alias mechanosensitive cation channel (MCA) 0.04 Archaeplastida
Solyc03g095820.4.1 No alias mechanosensitive cation channel (MCA) 0.03 Archaeplastida
Zm00001e000437_P001 No alias mechanosensitive cation channel (MCA) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 300 398
No external refs found!