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  5. AMTR_s00154p00028890

AMTR_s00154p00028890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.9

Description : Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana


Gene families : OG0009632 (Archaeplastida) Phylogenetic Tree(s): OG0009632_tree ,
OG_05_0009626 (LandPlants) Phylogenetic Tree(s): OG_05_0009626_tree ,
OG_06_0007907 (SeedPlants) Phylogenetic Tree(s): OG_06_0007907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00028890
Cluster HCCA: Cluster_97


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 67 112
IPR002885 Pentatricopeptide_repeat 1 40
IPR002885 Pentatricopeptide_repeat 168 184
IPR002885 Pentatricopeptide_repeat 125 154
No external refs found!