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  5. AMTR_s00154p00055550

AMTR_s00154p00055550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.35

Description : Glycerophosphodiester phosphodiesterase GDPD6 OS=Arabidopsis thaliana


Gene families : OG0002733 (Archaeplastida) Phylogenetic Tree(s): OG0002733_tree ,
OG_05_0004216 (LandPlants) Phylogenetic Tree(s): OG_05_0004216_tree ,
OG_06_0004158 (SeedPlants) Phylogenetic Tree(s): OG_06_0004158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00055550
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000663.56 No alias No description available 0.01 Archaeplastida
Gb_21490 No alias Glycerophosphodiester phosphodiesterase GDPD6... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006071 glycerol metabolic process IEA Interproscan
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046834 lipid phosphorylation IEP Neighborhood
BP GO:0046854 phosphatidylinositol phosphorylation IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004129 GlyceroP-diester-Pdiesterase 52 359
No external refs found!