1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00154p00057990

AMTR_s00154p00057990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.36

Description : RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00057990
Cluster HCCA: Cluster_220


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
InterPro domains Description Start Stop
IPR012463 Ninja_motif 49 115
No external refs found!