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  5. AMTR_s00154p00062710

AMTR_s00154p00062710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.38

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0005106 (LandPlants) Phylogenetic Tree(s): OG_05_0005106_tree ,
OG_06_0004065 (SeedPlants) Phylogenetic Tree(s): OG_06_0004065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00062710
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.02 Archaeplastida
GSVIVT01012036001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
LOC_Os01g61390.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
LOC_Os05g16280.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Zm00001e015280_P004 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004813 OPT 50 230
No external refs found!