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  5. AMTR_s00154p00064240

AMTR_s00154p00064240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.40

Description : Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0045444 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0040021 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00064240
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00228960 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
AMTR_s00016p00229620 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.chelation-based strategy... 0.05 Archaeplastida
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.03 Archaeplastida
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.02 Archaeplastida
GSVIVT01012036001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.02 Archaeplastida
GSVIVT01019646001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.03 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.06 Archaeplastida
LOC_Os04g44300.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
MA_924600g0010 No alias Probable metal-nicotianamine transporter YSL6... 0.05 Archaeplastida
MA_9934g0010 No alias iron chelator transporter (YSL) 0.04 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.04 Archaeplastida
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e015280_P004 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e015283_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e026901_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e041350_P003 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 34 84
IPR004813 OPT 94 190
No external refs found!