1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00154p00064550

AMTR_s00154p00064550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00154.41

Description : Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica


Gene families : OG0000193 (Archaeplastida) Phylogenetic Tree(s): OG0000193_tree ,
OG_05_0015209 (LandPlants) Phylogenetic Tree(s): OG_05_0015209_tree ,
OG_06_0014855 (SeedPlants) Phylogenetic Tree(s): OG_06_0014855_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00154p00064550
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00133560 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.05 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
LOC_Os04g32060.2 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os04g45900.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.04 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 Archaeplastida
MA_10433264g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 Archaeplastida
MA_508161g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Pp3c7_20710V3.1 No alias YELLOW STRIPE like 6 0.03 Archaeplastida
Zm00001e041266_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
InterPro domains Description Start Stop
IPR004813 OPT 49 116
No external refs found!