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  5. AMTR_s00155p00018120

AMTR_s00155p00018120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00155.7

Description : Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana


Gene families : OG0011004 (Archaeplastida) Phylogenetic Tree(s): OG0011004_tree ,
OG_05_0010565 (LandPlants) Phylogenetic Tree(s): OG_05_0010565_tree ,
OG_06_0040022 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00155p00018120
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_19310V3.1 No alias genomes uncoupled 1 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004828 serine-tRNA ligase activity IEP Neighborhood
BP GO:0006434 seryl-tRNA aminoacylation IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 181 202
IPR002885 Pentatricopeptide_repeat 105 152
IPR002885 Pentatricopeptide_repeat 207 254
IPR002885 Pentatricopeptide_repeat 5 52
No external refs found!