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Aliases : evm_27.TU.AmTr_v1.0_scaffold00155.12
Description : Protein PAT1 homolog OS=Arabidopsis thaliana
Gene families : OG0002447 (Archaeplastida) Phylogenetic Tree(s): OG0002447_tree ,
OG_05_0002022 (LandPlants) Phylogenetic Tree(s): OG_05_0002022_tree ,
OG_06_0001683 (SeedPlants) Phylogenetic Tree(s): OG_06_0001683_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00155p00028780 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre06.g278203 | No alias | No description available | 0.01 | Archaeplastida | |
| GSVIVT01015721001 | No alias | Protein PAT1 homolog 1 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| GSVIVT01020437001 | No alias | No description available | 0.04 | Archaeplastida | |
| Gb_01548 | No alias | mRNA decay factor (PAT1) | 0.02 | Archaeplastida | |
| Gb_36345 | No alias | mRNA decay factor (PAT1) | 0.03 | Archaeplastida | |
| MA_10376188g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Mp4g14040.1 | No alias | mRNA decay factor (PAT1) | 0.03 | Archaeplastida | |
| Pp3c24_12870V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Pp3c8_20970V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc05g016240.4.1 | No alias | mRNA decay factor (PAT1) | 0.05 | Archaeplastida | |
| Solyc12g017260.2.1 | No alias | mRNA decay factor (PAT1) | 0.04 | Archaeplastida | |
| Zm00001e014153_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e026088_P001 | No alias | mRNA decay factor (PAT1) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Neighborhood |
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Neighborhood |
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Neighborhood |
| BP | GO:0006101 | citrate metabolic process | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006470 | protein dephosphorylation | IEP | Neighborhood |
| BP | GO:0006606 | protein import into nucleus | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0015977 | carbon fixation | IEP | Neighborhood |
| BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Neighborhood |
| BP | GO:0017038 | protein import | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0034504 | protein localization to nucleus | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044448 | cell cortex part | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051170 | import into nucleus | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| BP | GO:0140029 | exocytic process | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |