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  5. AMTR_s00156p00076210

AMTR_s00156p00076210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00156.37

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL15 component


Gene families : OG0005820 (Archaeplastida) Phylogenetic Tree(s): OG0005820_tree ,
OG_05_0006820 (LandPlants) Phylogenetic Tree(s): OG_05_0006820_tree ,
OG_06_0010528 (SeedPlants) Phylogenetic Tree(s): OG_06_0010528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00156p00076210
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT3G25920 RPL15 ribosomal protein L15 0.09 Archaeplastida
Cpa|evm.model.tig00020934.40 No alias Protein biosynthesis.organelle translation... 0.01 Archaeplastida
Cre14.g612450 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
GSVIVT01011891001 No alias Protein biosynthesis.organelle translation... 0.07 Archaeplastida
LOC_Os03g12020.1 No alias component psRPL15 of large ribosomal subunit proteome 0.07 Archaeplastida
MA_648g0010 No alias component psRPL15 of large ribosomal subunit proteome 0.04 Archaeplastida
Mp1g23700.1 No alias component psRPL15 of large ribosomal subunit proteome 0.06 Archaeplastida
Pp3c20_9200V3.1 No alias ribosomal protein L15 0.04 Archaeplastida
Pp3c23_7670V3.1 No alias ribosomal protein L15 0.05 Archaeplastida
Pp3c24_11450V3.1 No alias ribosomal protein L15 0.04 Archaeplastida
Pp3c8_18220V3.1 No alias ribosomal protein L15 0.08 Archaeplastida
Solyc05g009370.4.1 No alias component psRPL15 of large ribosomal subunit proteome 0.07 Archaeplastida
Zm00001e000867_P001 No alias component psRPL15 of large ribosomal subunit proteome 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 92 219
No external refs found!