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  5. AMTR_s00159p00033510

AMTR_s00159p00033510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00159.10

Description : Endoglucanase 6 OS=Arabidopsis thaliana


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000489 (LandPlants) Phylogenetic Tree(s): OG_05_0000489_tree ,
OG_06_0000356 (SeedPlants) Phylogenetic Tree(s): OG_06_0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00159p00033510
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT1G75680 AtGH9B7, GH9B7 glycosyl hydrolase 9B7 0.05 Archaeplastida
AT2G44540 AtGH9B9, GH9B9 glycosyl hydrolase 9B9 0.02 Archaeplastida
AT2G44550 GH9B10, AtGH9B10 glycosyl hydrolase 9B10 0.02 Archaeplastida
AT4G02290 AtGH9B13, GH9B13 glycosyl hydrolase 9B13 0.04 Archaeplastida
GSVIVT01009881001 No alias Endoglucanase 10 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019420001 No alias Endoglucanase OS=Phaseolus vulgaris 0.06 Archaeplastida
GSVIVT01019523001 No alias Endoglucanase 6 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01037709001 No alias Endoglucanase 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_21027 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_26728 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_28546 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os05g12150.1 No alias Endoglucanase 15 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10241783g0010 No alias Endoglucanase 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_127108g0010 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_16152g0010 No alias endo-1,4-beta-glucanase 0.02 Archaeplastida
MA_182379g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_20530g0010 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_216572g0010 No alias Endoglucanase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_42717g0010 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_480961g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_5355g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_697188g0010 No alias Endoglucanase 17 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c13_24600V3.1 No alias glycosyl hydrolase 9C2 0.03 Archaeplastida
Pp3c26_160V3.1 No alias glycosyl hydrolase 9C3 0.11 Archaeplastida
Pp3c3_27100V3.1 No alias cellulase 2 0.1 Archaeplastida
Pp3c7_11750V3.1 No alias glycosyl hydrolase 9A4 0.01 Archaeplastida
Smo144066 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc04g081300.4.1 No alias Endoglucanase 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc07g049300.3.1 No alias Endoglucanase 11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g082250.3.1 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g083210.3.1 No alias Endoglucanase 1 OS=Persea americana... 0.02 Archaeplastida
Solyc09g010210.3.1 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e040931_P001 No alias endo-1,4-beta-glucanase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 23 484
IPR019028 CBM_49 529 606
No external refs found!