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  5. AMTR_s00160p00027170

AMTR_s00160p00027170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00160.5

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycoproteins.LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00160p00027170
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.05 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.06 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 Archaeplastida
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 Archaeplastida
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_29819 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os01g08470.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.06 Archaeplastida
LOC_Os03g55014.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g58110.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.04 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.08 Archaeplastida
Solyc04g078560.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.07 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.06 Archaeplastida
Solyc12g088950.3.1 No alias Pollen-specific leucine-rich repeat extensin-like... 0.02 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e007641_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e022985_P003 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.06 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 167 187
No external refs found!