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  5. AMTR_s00160p00067760

AMTR_s00160p00067760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00160.22

No description available


Gene families : OG0002516 (Archaeplastida) Phylogenetic Tree(s): OG0002516_tree ,
OG_05_0001658 (LandPlants) Phylogenetic Tree(s): OG_05_0001658_tree ,
OG_06_0000899 (SeedPlants) Phylogenetic Tree(s): OG_06_0000899_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00160p00067760
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00175150 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00051p00155030 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00054p00158190 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00064p00154150 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00080p00079830 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00332p00014300 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR024752 Myb/SANT-like_dom 4 47
No external refs found!