1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00160p00071720

AMTR_s00160p00071720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00160.25

Description : Solute transport.carrier-mediated transport.MC-type solute transporter


Gene families : OG0000569 (Archaeplastida) Phylogenetic Tree(s): OG0000569_tree ,
OG_05_0000829 (LandPlants) Phylogenetic Tree(s): OG_05_0000829_tree ,
OG_06_0001982 (SeedPlants) Phylogenetic Tree(s): OG_06_0001982_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00160p00071720
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Gb_12321 No alias solute transporter (MTCC) 0.03 Archaeplastida
Zm00001e036921_P001 No alias solute transporter (MTCC) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 186 277
IPR018108 Mitochondrial_sb/sol_carrier 83 178
IPR018108 Mitochondrial_sb/sol_carrier 286 373
No external refs found!