AMTR_s00161p00064200 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00161.24

Description : RNA processing.RNA modification.pseudouridylation.RsuA-type rRNA pseudouridine synthase

Gene families : OG0003651 (Archaeplastida) Phylogenetic Tree(s): OG0003651_tree ,
OG_05_0007210 (LandPlants) Phylogenetic Tree(s): OG_05_0007210_tree ,
OG_06_0010034 (SeedPlants) Phylogenetic Tree(s): OG_06_0010034_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00161p00064200
Cluster HCCA: Cluster_118

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 167 214
IPR006145 PsdUridine_synth_RsuA/RluD 230 322
No external refs found!